C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Son DNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147891 Son-004 ENSMUSG00000022961 10090 + 16:91659943-91679192 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaENSMUST00000147891
Transcript ID Bladder Brain Liver Muscle Ovary Placenta
ENSMUST00000147891 20.385±2.77 25.519±6.54 11.472±1.52 14.208±0.61 40.295±2.61 13.449±2.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000466 CIL_000466_0002 CGP 16:91621186-91679221
CIL_00037O CIL_00037O_0002 CGP 16:91647506-91688765

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300278 SON-003 protein_coding Homo_sapiens 0 1421
ENST00000303113 DONSON-008 protein_coding Homo_sapiens 8e-22 110
ENST00000356577 SON-001 protein_coding Homo_sapiens 0 2052
ENST00000381679 SON-006 protein_coding Homo_sapiens 0 911
ENST00000381692 SON-002 protein_coding Homo_sapiens 0 2052
ENST00000421541 SON-008 protein_coding Homo_sapiens 0 1284
ENST00000429093 SON-023 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000435919 RP11-367J7.4-001 processed_pseudogene Homo_sapiens 0 763
ENST00000436227 SON-007 protein_coding Homo_sapiens 0 1705
ENST00000455528 SON-004 nonsense_mediated_decay Homo_sapiens 0 1705
ENST00000457208 SON-013 nonsense_mediated_decay Homo_sapiens 0 924
ENST00000465834 SON-014 retained_intron Homo_sapiens 0 1513
ENST00000467616 SON-019 processed_transcript Homo_sapiens 0 712
ENST00000470533 SON-022 processed_transcript Homo_sapiens 0 769
ENST00000473102 SON-018 processed_transcript Homo_sapiens 0 848
ENST00000477419 SON-015 retained_intron Homo_sapiens 0 785
ENST00000478183 SON-009 retained_intron Homo_sapiens 0 1448
ENST00000484294 SON-017 processed_transcript Homo_sapiens 0 710
ENST00000491794 SON-016 retained_intron Homo_sapiens 0 933

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