C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: src homology 2 domain-containing transforming protein B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147926 Shb-002 ENSMUSG00000044813 10090 - 4:45423278-45482802 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000147926
Transcript ID Liver
ENSMUST00000147926 8.817±2.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081A CIL_00081A_0002 VISTA 4:45205842-45807105
CIL_0006TM CIL_0006TM_0002 CGP 4:45395923-45532470
CIL_0006TL CIL_0006TL_0002 CGP 4:45423278-45804604

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377707 SHB-001 protein_coding Homo_sapiens 0 1055
ENST00000540557 RP11-613M10.9-001 nonsense_mediated_decay Homo_sapiens 0 590

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