C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubby candidate gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147943 Tub-003 ENSMUSG00000031028 10090 + 7:109027223-109029360 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000147943
Transcript ID Liver
ENSMUST00000147943 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096V CIL_00096V_0002 VISTA 7:108496607-109099113
CIL_0009BA CIL_0009BA_0002 VISTA 7:108813133-109417303
CIL_0008M3 CIL_0008M3_0002 VISTA 7:108861322-109462713
CIL_0009BB CIL_0009BB_0002 VISTA 7:108902812-109503341
CIL_00046S CIL_00046S_0002 CGP 7:108934417-109034460
CIL_0007IX CIL_0007IX_0003 CGP 7:109010825-109083331

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299506 TUB-003 protein_coding Homo_sapiens 0 296
ENST00000305253 TUB-002 protein_coding Homo_sapiens 0 296
ENST00000534099 TUB-001 protein_coding Homo_sapiens 0 296

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