C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prolactin regulatory element binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148214 Preb-011 ENSMUSG00000045302 10090 - 5:30950853-30959234 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000148214
Transcript ID Brain Placenta
ENSMUST00000148214 1.303±0.00 2.059±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260643 PREB-001 protein_coding Homo_sapiens 8e-27 126
ENST00000316470 ABHD1-001 protein_coding Homo_sapiens 3e-39 167
ENST00000406567 PREB-003 protein_coding Homo_sapiens 7e-27 126
ENST00000420647 ABHD1-003 nonsense_mediated_decay Homo_sapiens 3e-39 167
ENST00000430533 PREB-010 protein_coding Homo_sapiens 2e-28 130
ENST00000441451 PREB-008 nonsense_mediated_decay Homo_sapiens 3e-23 111
ENST00000444452 PREB-002 nonsense_mediated_decay Homo_sapiens 8e-27 126
ENST00000448950 ABHD1-002 nonsense_mediated_decay Homo_sapiens 3e-39 167
ENST00000456259 PREB-009 protein_coding Homo_sapiens 1e-27 128
ENST00000468045 PREB-005 retained_intron Homo_sapiens 1e-26 126
ENST00000489120 ABHD1-005 retained_intron Homo_sapiens 4e-39 167
ENST00000591566 MEF2BNB-012 retained_intron Homo_sapiens 0.00000003 66
ENST00000621324 ABHD1-201 protein_coding Homo_sapiens 2e-39 167

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