C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial translation optimization 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148238 Mto1-007 ENSMUSG00000032342 10090 + 9:78448208-78474152 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungOvaryENSMUST00000148238
Transcript ID Adrenal Breast Colon Heart Liver Lung Ovary
ENSMUST00000148238 6.692±1.13 1.697±0.58 2.891±0.66 1.159±0.08 3.563±1.23 3.426±0.00 5.939±2.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0002 CGP 9:78448208-78489151

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002098 IGI tRNA wobble uridine modification
GO:0005739 ISO mitochondrion
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0070899 IGI mitochondrial tRNA wobble uridine modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370300 MTO1-003 protein_coding Homo_sapiens 0 863
ENST00000370305 MTO1-007 protein_coding Homo_sapiens 0 863
ENST00000370308 MTO1-002 retained_intron Homo_sapiens 0 1099
ENST00000415228 MTO1-005 nonsense_mediated_decay Homo_sapiens 0 1722
ENST00000415954 MTO1-012 protein_coding Homo_sapiens 0 713
ENST00000442897 MTO1-014 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000445187 MTO1-006 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000462039 MTO1-004 retained_intron Homo_sapiens 0 869
ENST00000466977 MTO1-009 retained_intron Homo_sapiens 0 366
ENST00000498286 MTO1-001 protein_coding Homo_sapiens 0 1219
ENST00000518210 MTO1-016 processed_transcript Homo_sapiens 0 359
ENST00000521032 MTO1-015 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000521156 MTO1-019 protein_coding Homo_sapiens 0 424
ENST00000522205 MTO1-011 nonsense_mediated_decay Homo_sapiens 0 357

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