C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like gene family 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148313 Tmc4-004 ENSMUSG00000019734 10090 - 7:3670674-3676627 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLungOvaryENSMUST00000148313
Transcript ID Breast Colon Kidney Lung Ovary
ENSMUST00000148313 16.144±5.43 138.792±16.33 9.800±0.00 18.463±0.90 18.022±2.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U4 CIL_0001U4_0002 CGP 7:3645290-3665840
CIL_0001GV CIL_0001GV_0002 CGP 7:3660098-3677524
CIL_0001JN CIL_0001JN_0002 CGP 7:3665790-3693523

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000446291 TMC4-002 protein_coding Homo_sapiens 0 342
ENST00000476013 TMC4-004 processed_transcript Homo_sapiens 0 342
ENST00000610383 TMC4-002 protein_coding Homo_sapiens 0 342
ENST00000610766 TMC4-005 processed_transcript Homo_sapiens 0 337
ENST00000612564 TMC4-001 protein_coding Homo_sapiens 0 704
ENST00000612712 TMC4-202 protein_coding Homo_sapiens 0 710
ENST00000613354 TMC4-205 protein_coding Homo_sapiens 0 710
ENST00000616323 TMC4-201 protein_coding Homo_sapiens 0 710
ENST00000616977 TMC4-001 protein_coding Homo_sapiens 0 704
ENST00000617430 TMC4-004 processed_transcript Homo_sapiens 0 342
ENST00000617472 TMC4-011 protein_coding Homo_sapiens 0 710
ENST00000618362 TMC4-005 processed_transcript Homo_sapiens 0 337
ENST00000618950 TMC4-011 protein_coding Homo_sapiens 0 710
ENST00000619470 TMC4-203 protein_coding Homo_sapiens 0 710
ENST00000619895 TMC4-001 protein_coding Homo_sapiens 0 710
ENST00000620520 TMC4-206 protein_coding Homo_sapiens 0 710
ENST00000621539 TMC4-002 protein_coding Homo_sapiens 0 704
ENST00000621671 TMC4-001 protein_coding Homo_sapiens 0 710
ENST00000621826 TMC4-002 protein_coding Homo_sapiens 0 704
ENST00000622368 TMC4-204 protein_coding Homo_sapiens 0 710

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