C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor class B, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148373 Scarb1-003 ENSMUSG00000037936 10090 - 5:125283355-125341019 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000148373
Transcript ID Brain Ovary Testis
ENSMUST00000148373 4.822±0.00 73.969±14.35 7.609±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000399 CIL_000399_0002 CGP 5:125017153-125341094
CIL_00006N CIL_00006N_0003 CGP 5:125277087-125390202

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261693 SCARB1-004 protein_coding Homo_sapiens 0 1031
ENST00000339570 SCARB1-001 protein_coding Homo_sapiens 0 1031
ENST00000415380 SCARB1-006 protein_coding Homo_sapiens 0 1033
ENST00000535005 SCARB1-003 processed_transcript Homo_sapiens 0 942
ENST00000538291 SCARB1-005 retained_intron Homo_sapiens 0 1033
ENST00000544327 SCARB1-009 protein_coding Homo_sapiens 0 942
ENST00000546215 SCARB1-007 protein_coding Homo_sapiens 0 990

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