C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline/serine-rich coiled-coil 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148509 Psrc1-009 ENSMUSG00000068744 10090 + 3:108384857-108386704 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyTestisENSMUST00000148509
Transcript ID Colon Kidney Testis
ENSMUST00000148509 1.058±0.00 0.192±0.00 0.670±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009987 IDA cellular process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369903 PSRC1-010 protein_coding Homo_sapiens 0 510
ENST00000369904 PSRC1-002 protein_coding Homo_sapiens 0 440
ENST00000369907 PSRC1-001 protein_coding Homo_sapiens 0 510
ENST00000369909 PSRC1-201 protein_coding Homo_sapiens 0 510
ENST00000409138 PSRC1-003 protein_coding Homo_sapiens 0 440
ENST00000409267 PSRC1-009 protein_coding Homo_sapiens 0 510
ENST00000418914 PSRC1-006 protein_coding Homo_sapiens 0 440
ENST00000429031 PSRC1-005 protein_coding Homo_sapiens 0 440
ENST00000459765 PSRC1-008 retained_intron Homo_sapiens 0 372
ENST00000471740 PSRC1-011 retained_intron Homo_sapiens 0 372
ENST00000474126 PSRC1-007 protein_coding Homo_sapiens 1e-27 126
ENST00000492431 PSRC1-004 retained_intron Homo_sapiens 0 512

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