C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-Coenzyme A oxidase 1, palmitoyl
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148601 Acox1-003 ENSMUSG00000020777 10090 - 11:116171888-116189575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000148601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000148601 58.762±27.10 27.572±5.86 13.589±0.00 9.338±1.68 34.763±13.63 17.085±2.18 27.434±4.36 23.129±4.40 86.573±71.66 12.172±3.33 10.530±3.73 11.404±1.23 4.581±1.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078W CIL_00078W_0002 CGP 11:116142285-116199045
CIL_00078M CIL_00078M_0002 CGP 11:116171888-116215318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 TAS acyl-CoA oxidase activity
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005777 TAS peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0006635 TAS fatty acid beta-oxidation
GO:0007283 IMP spermatogenesis
GO:0030165 ISO PDZ domain binding
GO:0050660 IEA flavin adenine dinucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293217 ACOX1-001 protein_coding Homo_sapiens 0 1652
ENST00000301608 ACOX1-002 protein_coding Homo_sapiens 0 1461
ENST00000572047 ACOX1-004 nonsense_mediated_decay Homo_sapiens 0 1652
ENST00000573078 ACOX1-003 nonsense_mediated_decay Homo_sapiens 0 1871
ENST00000576743 ACOX1-005 protein_coding Homo_sapiens 0 226
ENST00000587927 ACOX1-009 protein_coding Homo_sapiens 0 320
ENST00000588176 ACOX1-012 protein_coding Homo_sapiens 0 226
ENST00000588968 ACOX1-014 protein_coding Homo_sapiens 0 311
ENST00000591857 ACOX1-010 processed_transcript Homo_sapiens 0 337

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