C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cortactin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148602 Cttnbp2-001 ENSMUSG00000000416 10090 - 6:18366707-18514749 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000148602
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000148602 0.348±0.00 0.282±0.00 7.750±2.26 0.110±0.00 0.108±0.00 0.050±0.04 0.064±0.04 0.504±0.20 0.098±0.06 0.411±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U6 CIL_0005U6_0003 CGP 6:18170687-18514869
CIL_0003QX CIL_0003QX_0002 CGP 6:18366478-18855751

Gene Ontology

GO IDEvidence TypeGO Description
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160373 CTTNBP2-001 protein_coding Homo_sapiens 0 3598
ENST00000412853 CTTNBP2-007 protein_coding Homo_sapiens 0 418
ENST00000416239 CTTNBP2-004 protein_coding Homo_sapiens 0 326
ENST00000434890 CTTNBP2-002 protein_coding Homo_sapiens 0 643
ENST00000435233 CTTNBP2-009 protein_coding Homo_sapiens 0 388
ENST00000441556 CTTNBP2-012 nonsense_mediated_decay Homo_sapiens 0 5494
ENST00000445366 CTTNBP2-010 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000446636 CTTNBP2-011 protein_coding Homo_sapiens 0 3591
ENST00000454375 CTTNBP2-006 protein_coding Homo_sapiens 0 562
ENST00000467088 CTTNBP2-008 retained_intron Homo_sapiens 0 496

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