C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: androglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148816 Adgb-002 ENSMUSG00000050994 10090 - 10:10335709-10411744 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148816
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148816 0.192±0.05 0.070±0.02 0.048±0.00 0.102±0.04 0.122±0.08 0.086±0.00 0.049±0.02 0.192±0.12 0.685±0.11 0.020±0.01 0.578±0.43 0.013±0.01 3.633±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J4 CIL_0004J4_0002 CGP 10:9755547-10472326
CIL_00050P CIL_00050P_0002 CGP 10:10335703-10558233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005737 IBA cytoplasm
GO:0006508 IBA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326929 ADGB-006 retained_intron Homo_sapiens 7e-33 147
ENST00000367490 ADGB-002 protein_coding Homo_sapiens 0 521
ENST00000397944 ADGB-009 protein_coding Homo_sapiens 0 1543
ENST00000480328 ADGB-001 nonsense_mediated_decay Homo_sapiens 0 1286
ENST00000493950 ADGB-007 nonsense_mediated_decay Homo_sapiens 0 1218

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