C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (metal ion transporter), member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149034 Slc39a11-003 ENSMUSG00000041654 10090 - 11:113463953-113565779 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000149034
Transcript ID Muscle
ENSMUST00000149034 0.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096Z CIL_00096Z_0002 VISTA 11:112713161-113315514
CIL_00067E CIL_00067E_0002 CGP 11:112782224-113650079
CIL_00067F CIL_00067F_0002 CGP 11:113244853-113650079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255559 SLC39A11-001 protein_coding Homo_sapiens 0 496
ENST00000542342 SLC39A11-002 protein_coding Homo_sapiens 0 520
ENST00000578620 SLC39A11-004 protein_coding Homo_sapiens 3e-30 135
ENST00000579018 SLC39A11-005 protein_coding Homo_sapiens 9.94922e-44 180
ENST00000579491 SLC39A11-011 processed_transcript Homo_sapiens 5e-29 132
ENST00000579732 SLC39A11-012 protein_coding Homo_sapiens 0 496
ENST00000580557 SLC39A11-003 protein_coding Homo_sapiens 0 496
ENST00000581005 SLC39A11-009 processed_transcript Homo_sapiens 0 207
ENST00000582179 SLC39A11-008 retained_intron Homo_sapiens 0 316
ENST00000582769 SLC39A11-016 protein_coding Homo_sapiens 4e-29 132
ENST00000583146 SLC39A11-007 protein_coding Homo_sapiens 0 521
ENST00000584129 SLC39A11-010 nonsense_mediated_decay Homo_sapiens 6e-29 132

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