C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149160 Ccnl1-006 ENSMUSG00000027829 10090 - 3:65948892-65958181 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryENSMUST00000149160
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary
ENSMUST00000149160 4.111±1.32 54.075±19.30 2.536±0.00 34.385±5.24 8.478±1.20 1.081±0.23 2.684±0.86 10.135±3.71 44.600±15.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081H CIL_00081H_0002 VISTA 3:65626895-66230134
CIL_00028X CIL_00028X_0002 CGP 3:65666228-65958249
CIL_00028W CIL_00028W_0002 CGP 3:65946151-66296837

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295925 CCNL1-201 protein_coding Homo_sapiens 0 625
ENST00000295926 CCNL1-001 protein_coding Homo_sapiens 0 837
ENST00000461804 CCNL1-002 protein_coding Homo_sapiens 0 837
ENST00000464316 CCNL1-006 retained_intron Homo_sapiens 0 268
ENST00000464575 CCNL1-015 retained_intron Homo_sapiens 0 392
ENST00000465947 CCNL1-012 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000466101 CCNL1-011 retained_intron Homo_sapiens 0 444
ENST00000467081 CCNL1-014 retained_intron Homo_sapiens 0 501
ENST00000470121 CCNL1-005 nonsense_mediated_decay Homo_sapiens 0 837
ENST00000471044 CCNL1-010 retained_intron Homo_sapiens 0 627
ENST00000471247 CCNL1-008 retained_intron Homo_sapiens 0 933
ENST00000474539 CCNL1-007 retained_intron Homo_sapiens 0 933
ENST00000475298 CCNL1-003 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000476367 CCNL1-004 retained_intron Homo_sapiens 0 625
ENST00000477127 CCNL1-009 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000478454 CCNL1-016 retained_intron Homo_sapiens 0 287
ENST00000479052 CCNL1-017 processed_transcript Homo_sapiens 0 217
ENST00000479596 CCNL1-013 retained_intron Homo_sapiens 0 625
ENST00000483789 CCNL1-018 retained_intron Homo_sapiens 0 451

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