C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149639 Ddx3x-005 ENSMUSG00000000787 10090 + X:13287785-13289915 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000149639
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000149639 59.531±0.00 137.656±0.00 125.170±40.10 9.987±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QB CIL_0005QB_0002 CGP X:13071498-13294052
CIL_0007LW CIL_0007LW_0002 UCNEbase X:13169486-13522078
CIL_0001X4 CIL_0001X4_0003 CGP X:13280970-13489313

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336079 DDX3Y-003 protein_coding Homo_sapiens 0 732
ENST00000360160 DDX3Y-001 protein_coding Homo_sapiens 0 732
ENST00000399959 DDX3X-001 protein_coding Homo_sapiens 0 904
ENST00000457138 DDX3X-201 protein_coding Homo_sapiens 0 904
ENST00000463199 DDX3Y-007 processed_transcript Homo_sapiens 0 233
ENST00000478993 DDX3X-002 nonsense_mediated_decay Homo_sapiens 0 904
ENST00000495478 DDX3Y-008 processed_transcript Homo_sapiens 1e-39 167
ENST00000506389 DDX3YP3-001 processed_pseudogene Homo_sapiens 0 616
ENST00000542215 DDX3X-004 processed_transcript Homo_sapiens 0 569
ENST00000623700 DDX3Y-201 protein_coding Homo_sapiens 0 732

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