C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149658 Cstf2-003 ENSMUSG00000031256 10090 + X:134059334-134086819 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverMuscleOvaryPlacentaENSMUST00000149658
Transcript ID Adrenal Brain Breast Heart Liver Muscle Ovary Placenta
ENSMUST00000149658 1.139±0.09 1.925±0.55 0.594±0.00 0.228±0.01 0.379±0.07 0.197±0.01 1.172±0.33 0.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BC CIL_0007BC_0002 CGP X:133936385-134086819
CIL_0000YO CIL_0000YO_0003 CGP X:134059187-134221956

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372972 CSTF2-001 protein_coding Homo_sapiens 0 1061
ENST00000413437 CSTF2-004 protein_coding Homo_sapiens 0 830
ENST00000415585 CSTF2-201 protein_coding Homo_sapiens 0 1064
ENST00000475126 CSTF2-003 nonsense_mediated_decay Homo_sapiens 0 841

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