C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: torsin family 2, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149720 Tor2a-007 ENSMUSG00000009563 10090 + 2:32757276-32762242 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000149720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000149720 3.658±0.70 5.092±1.36 3.111±0.53 3.450±2.00 4.925±1.24 4.398±0.30 1.590±0.24 3.306±0.38 3.542±0.00 5.096±1.08 0.486±0.13 8.998±3.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075N CIL_00075N_0002 CGP 2:32757026-32775633

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336067 TOR2A-005 protein_coding Homo_sapiens 0 261
ENST00000373281 TOR2A-002 protein_coding Homo_sapiens 0 261
ENST00000373284 TOR2A-006 protein_coding Homo_sapiens 0 832
ENST00000463256 TOR2A-008 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000463577 TOR2A-004 protein_coding Homo_sapiens 0 261
ENST00000472723 TOR2A-003 retained_intron Homo_sapiens 0 361
ENST00000493439 TOR2A-009 protein_coding Homo_sapiens 7e-24 115
ENST00000494135 TOR2A-001 retained_intron Homo_sapiens 0 361
ENST00000496460 TOR2A-007 nonsense_mediated_decay Homo_sapiens 0 573

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