C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: speckle-type POZ protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150884 Spop-003 ENSMUSG00000057522 10090 + 11:95414095-95474314 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127
CIL_000877 CIL_000877_0002 VISTA 11:95055809-95658196
CIL_0009BV CIL_0009BV_0002 VISTA 11:95055825-95658170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0016607 IDA nuclear speck
GO:0042593 IGI glucose homeostasis
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043161 IGI proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1902237 IGI positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:2000676 IGI positive regulation of type B pancreatic cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347630 SPOP-201 protein_coding Homo_sapiens 0 516
ENST00000393328 SPOP-001 protein_coding Homo_sapiens 0 520
ENST00000451526 SPOP-017 protein_coding Homo_sapiens 0 226
ENST00000502385 SPOP-018 processed_transcript Homo_sapiens 0 198
ENST00000503676 SPOP-007 protein_coding Homo_sapiens 0 516
ENST00000504102 SPOP-005 protein_coding Homo_sapiens 0 628
ENST00000504212 SPOP-019 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000505581 SPOP-011 protein_coding Homo_sapiens 0 516
ENST00000506399 SPOP-015 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000507970 SPOP-013 protein_coding Homo_sapiens 0 516
ENST00000508805 SPOP-010 protein_coding Homo_sapiens 0 270
ENST00000509079 SPOP-012 protein_coding Homo_sapiens 0 516
ENST00000509765 SPOP-014 retained_intron Homo_sapiens 0 309
ENST00000510476 SPOP-008 protein_coding Homo_sapiens 0 392
ENST00000513080 SPOP-016 processed_transcript Homo_sapiens 0 501
ENST00000514121 SPOP-009 protein_coding Homo_sapiens 0 516
ENST00000515508 SPOP-020 protein_coding Homo_sapiens 0 518

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