C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151120 Ctsd-001 ENSMUSG00000007891 10090 - 7:142375910-142388038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000151120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000151120 885.532±258.53 370.678±64.37 412.845±53.07 68.316±1.87 339.733±69.80 147.731±14.48 348.229±17.59 332.921±51.74 159.643±39.79 349.537±11.52 239.173±5.02 299.579±56.23 293.341±28.93 29.104±13.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_00048D CIL_00048D_0002 CGP 7:142325837-142388038
CIL_00048K CIL_00048K_0002 CGP 7:142371148-142440396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0004190 IDA aspartic-type endopeptidase activity
GO:0005739 IDA mitochondrion
GO:0005764 IDA lysosome
GO:0006508 IC proteolysis
GO:0008233 IDA peptidase activity

Homologs

No Homologs available.

Loading