C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000151446  |
Ddx56-002 |
ENSMUSG00000004393 |
10090 | - |
11:6265637-6267772  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000J3 | CIL_0000J3_0002 | CGP | 11:6211013-6267772 |
| CIL_0000J4 | CIL_0000J4_0002 | CGP | 11:6258919-6274870 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005730 | IDA | nucleolus |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000258772
|
DDX56-001 | protein_coding | Homo_sapiens | 0 | 584 |
|
ENST00000415758
|
DDX56-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 453 |
|
ENST00000421223
|
DDX56-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 584 |
|
ENST00000431640
|
DDX56-003 | protein_coding | Homo_sapiens | 0 | 584 |
|
ENST00000433257
|
DDX56-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 584 |
|
ENST00000446987
|
DDX56-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 532 |
|
ENST00000467318
|
DDX56-006 | processed_transcript | Homo_sapiens | 0 | 584 |
|
ENST00000485367
|
DDX56-005 | processed_transcript | Homo_sapiens | 0 | 584 |
