C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier, Aralar), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151937 Slc25a12-001 ENSMUSG00000027010 10090 - 2:71271063-71367749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000151937
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000151937 1.321±0.92 4.518±0.77 2.578±0.60 4.072±1.01 2.645±1.48 2.011±0.40 6.557±1.80 5.001±0.84 1.019±0.23 2.334±0.45 20.316±1.46 2.431±0.68 0.893±0.15 0.119±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_00062P CIL_00062P_0003 CGP 2:71211706-71367749
CIL_0008C9 CIL_0008C9_0002 VISTA 2:71216484-71818219
CIL_0009AY CIL_0009AY_0002 VISTA 2:71227336-71828847
CIL_0008AZ CIL_0008AZ_0002 VISTA 2:71235378-71836557
CIL_0008B0 CIL_0008B0_0002 VISTA 2:71237156-71838581
CIL_0007JJ CIL_0007JJ_002C UCNEbase 2:71244754-71538420
CIL_0004K0 CIL_0004K0_0002 CGP 2:71271063-71441622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005313 ISS L-glutamate transmembrane transporter activity
GO:0005509 ISS calcium ion binding
GO:0005739 ISS mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0015183 ISS L-aspartate transmembrane transporter activity
GO:0015810 ISS aspartate transport
GO:0015813 ISS L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0043490 ISS malate-aspartate shuttle
GO:0051592 ISS response to calcium ion
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246069 DSTN-001 protein_coding Homo_sapiens 0.00007 55
ENST00000263812 SLC25A12-006 nonsense_mediated_decay Homo_sapiens 0 1956
ENST00000299977 SLFN5-001 protein_coding Homo_sapiens 0.00005 57
ENST00000422440 SLC25A12-001 protein_coding Homo_sapiens 0 2470
ENST00000426896 SLC25A12-007 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000464063 SLC25A12-010 processed_transcript Homo_sapiens 0 285
ENST00000472070 SLC25A12-002 retained_intron Homo_sapiens 0 518
ENST00000472748 SLC25A12-009 processed_transcript Homo_sapiens 0 569
ENST00000475360 SLC25A12-003 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000484227 SLC25A12-008 processed_transcript Homo_sapiens 0 433
ENST00000485880 SLC25A12-004 retained_intron Homo_sapiens 0 351

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