C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152019 Ctr9-002 ENSMUSG00000005609 10090 + 7:111028995-111047647 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JB CIL_0004JB_0002 CGP 7:110868266-111056377
CIL_000417 CIL_000417_0003 CGP 7:111028951-111083030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248598 FGL2-001 protein_coding Homo_sapiens 0.0003 53
ENST00000263275 OPA3-002 protein_coding Homo_sapiens 0.0005 53
ENST00000270066 SMG9-001 protein_coding Homo_sapiens 0.000002 60
ENST00000296096 TCF23-001 protein_coding Homo_sapiens 0.0003 53
ENST00000316731 CCZ1B-001 protein_coding Homo_sapiens 0.0002 53
ENST00000358657 SLC4A8-201 protein_coding Homo_sapiens 0.0008 53
ENST00000361367 CTR9-001 protein_coding Homo_sapiens 0 2815
ENST00000367069 RSPH3-001 protein_coding Homo_sapiens 0.0004 53
ENST00000371481 FFAR4-001 protein_coding Homo_sapiens 0.0002 53
ENST00000371483 FFAR4-002 protein_coding Homo_sapiens 0.0002 53
ENST00000373836 PHACTR4-004 protein_coding Homo_sapiens 0.0001 55
ENST00000373839 PHACTR4-001 protein_coding Homo_sapiens 0.0001 55
ENST00000378823 RAD50-001 protein_coding Homo_sapiens 0.0005 53
ENST00000427960 WDR75-002 nonsense_mediated_decay Homo_sapiens 0.0003 53
ENST00000441564 PSD4-003 protein_coding Homo_sapiens 0.0007 53
ENST00000445782 MZT2A-002 retained_intron Homo_sapiens 0.00006 53
ENST00000449822 RSPH3-002 protein_coding Homo_sapiens 0.0001 53
ENST00000453097 SLC4A8-001 protein_coding Homo_sapiens 0.0008 53
ENST00000472030 RNF103-002 retained_intron Homo_sapiens 0.0003 53
ENST00000472298 N4BP2L1-007 retained_intron Homo_sapiens 0.00009 53
ENST00000476784 TTC3-007 retained_intron Homo_sapiens 0.0005 53
ENST00000507114 ANKRD40-002 retained_intron Homo_sapiens 0.00004 53
ENST00000508413 HSD17B11-008 processed_transcript Homo_sapiens 0.00004 53
ENST00000521329 RARS-004 nonsense_mediated_decay Homo_sapiens 0.00004 53
ENST00000524523 CTR9-002 protein_coding Homo_sapiens 0 1005
ENST00000526874 CTR9-003 retained_intron Homo_sapiens 0 669
ENST00000529355 CTR9-004 retained_intron Homo_sapiens 0 542
ENST00000546474 BRF1-002 protein_coding Homo_sapiens 0.001 53
ENST00000558173 TRIM69-006 protein_coding Homo_sapiens 0.0004 53
ENST00000573603 POLR2A-009 retained_intron Homo_sapiens 0.00004 53
ENST00000576274 NDC80-013 protein_coding Homo_sapiens 0.00007 53
ENST00000583437 TMEM98-006 protein_coding Homo_sapiens 0.00005 53
ENST00000614987 RPS6KA5-001 protein_coding Homo_sapiens 0.002 53

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