C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein L13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152444  |
Rpl13-003 |
ENSMUSG00000000740 |
10090 | + |
8:123102651-123103641  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008HA | CIL_0008HA_0002 | VISTA | 8:122617544-123223043 |
| CIL_000331 | CIL_000331_0002 | CGP | 8:123062942-123105244 |
| CIL_0006AP | CIL_0006AP_0003 | CGP | 8:123102350-123135182 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000311528
|
RPL13-001 | protein_coding | Homo_sapiens | 0 | 521 |
|
ENST00000393099
|
RPL13-002 | protein_coding | Homo_sapiens | 0 | 521 |
|
ENST00000399461
|
RPL13-003 | retained_intron | Homo_sapiens | 0 | 375 |
|
ENST00000440687
|
RPL13P2-001 | processed_pseudogene | Homo_sapiens | 0 | 209 |
|
ENST00000452368
|
RPL13-015 | protein_coding | Homo_sapiens | 0 | 313 |
|
ENST00000467736
|
RPL13-006 | protein_coding | Homo_sapiens | 0 | 468 |
|
ENST00000484610
|
RPL13-004 | retained_intron | Homo_sapiens | 0 | 292 |
|
ENST00000487034
|
RPL13-007 | retained_intron | Homo_sapiens | 1e-35 | 154 |
|
ENST00000491523
|
RPL13-005 | retained_intron | Homo_sapiens | 0 | 375 |
|
ENST00000562879
|
RPL13-011 | nonsense_mediated_decay | Homo_sapiens | 6e-35 | 152 |
|
ENST00000563270
|
RPL13-016 | protein_coding | Homo_sapiens | 0 | 374 |
|
ENST00000563749
|
RPL13-010 | retained_intron | Homo_sapiens | 4e-35 | 154 |
|
ENST00000565571
|
RPL13-018 | retained_intron | Homo_sapiens | 0 | 525 |
|
ENST00000567815
|
RPL13-009 | protein_coding | Homo_sapiens | 0 | 521 |
