C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) I polypeptide C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152583 Polr1c-003 ENSMUSG00000067148 10090 - 17:46244524-46247932 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryENSMUST00000152583
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary
ENSMUST00000152583 10.472±0.45 14.482±0.00 7.988±3.30 8.494±0.24 2.414±0.00 11.244±3.47 7.233±1.77 22.639±4.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_0005N0 CIL_0005N0_0002 CGP 17:46243920-46252537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304004 POLR1C-006 protein_coding Homo_sapiens 0 771
ENST00000372344 POLR1C-005 protein_coding Homo_sapiens 0 621
ENST00000372389 POLR1C-008 protein_coding Homo_sapiens 0 771
ENST00000423780 POLR1C-007 protein_coding Homo_sapiens 0 346
ENST00000428025 POLR1C-009 protein_coding Homo_sapiens 0 488
ENST00000455605 POLR1C-010 retained_intron Homo_sapiens 0 350
ENST00000481352 POLR1C-004 retained_intron Homo_sapiens 0 350
ENST00000488601 POLR1C-001 retained_intron Homo_sapiens 0 350
ENST00000512472 POLR1C-002 retained_intron Homo_sapiens 0 209

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