C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Xrcc1 N-terminal domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153176 Xndc1-004 ENSMUSG00000099481 10090 + 7:102065520-102080295 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000153176
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153176 2.090±0.00 2.845±0.00 4.258±1.55 2.845±0.86 1.042±0.23 2.894±0.88 2.398±0.37 0.866±0.25 3.033±0.95 2.204±0.53 4.053±2.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZS CIL_0002ZS_0002 CGP 7:102065511-102096864

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000528184 RP11-849H4.2-004 protein_coding Homo_sapiens 5.04467e-44 182
ENST00000528511 RP11-849H4.2-003 protein_coding Homo_sapiens 0 510
ENST00000529513 RP11-849H4.2-006 protein_coding Homo_sapiens 0 403
ENST00000529844 RP11-849H4.2-001 protein_coding Homo_sapiens 0 405
ENST00000532852 RP11-849H4.2-009 protein_coding Homo_sapiens 0 427
ENST00000533047 RP11-849H4.2-002 protein_coding Homo_sapiens 0 320
ENST00000534704 RP11-849H4.2-008 protein_coding Homo_sapiens 0 296

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