C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: secernin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153482 Scrn2-003 ENSMUSG00000020877 10090 + 11:97030134-97032276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000153482
Transcript ID Ovary Testis
ENSMUST00000153482 3.004±0.75 0.989±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0016805 IEA dipeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290216 SCRN2-001 protein_coding Homo_sapiens 0 599
ENST00000407215 SCRN2-002 protein_coding Homo_sapiens 0 599
ENST00000578323 SCRN2-013 protein_coding Homo_sapiens 0 597
ENST00000579856 SCRN2-008 nonsense_mediated_decay Homo_sapiens 5.60519e-45 185
ENST00000581645 SCRN2-003 nonsense_mediated_decay Homo_sapiens 0 599
ENST00000582459 SCRN2-004 nonsense_mediated_decay Homo_sapiens 4.06377e-44 183
ENST00000582656 SCRN2-012 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000583090 SCRN2-010 nonsense_mediated_decay Homo_sapiens 4.2039e-45 185
ENST00000584123 SCRN2-006 protein_coding Homo_sapiens 0 603
ENST00000584567 SCRN2-011 protein_coding Homo_sapiens 1e-26 124

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