C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153524 Calm1-003 ENSMUSG00000001175 10090 + 12:100199529-100203937 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000153524
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000153524 173.076±15.47 253.405±38.07 112.221±0.00 144.274±18.75 268.753±39.31 417.168±35.50 39.800±8.07 72.044±12.44 66.444±21.01 254.878±68.83 217.222±19.06 152.367±8.60 190.440±6.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U8 CIL_0001U8_0002 CGP 12:100125452-100209806
CIL_0005CA CIL_0005CA_0002 CGP 12:100199435-100520822

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356978 CALM1-001 protein_coding Homo_sapiens 0 357
ENST00000447653 CALM1-004 protein_coding Homo_sapiens 0 252
ENST00000544280 CALM1-006 protein_coding Homo_sapiens 0 252
ENST00000553422 CALM1-013 nonsense_mediated_decay Homo_sapiens 4e-23 111
ENST00000553542 CALM1-012 protein_coding Homo_sapiens 0 252
ENST00000553630 CALM1-003 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000553964 CALM1-005 retained_intron Homo_sapiens 0 252
ENST00000553995 CALM1-010 retained_intron Homo_sapiens 0 351
ENST00000555267 CALM1-011 retained_intron Homo_sapiens 0 252
ENST00000556757 CALM1-009 retained_intron Homo_sapiens 0 405
ENST00000557020 CALM1-007 protein_coding Homo_sapiens 0 252
ENST00000557123 CALM1-008 retained_intron Homo_sapiens 4e-34 148

Loading