C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153611 Ddx3x-003 ENSMUSG00000000787 10090 + X:13281032-13287872 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000153611
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000153611 62.297±0.00 180.822±0.00 131.902±62.83 49.384±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QB CIL_0005QB_0002 CGP X:13071498-13294052
CIL_0007LW CIL_0007LW_0002 UCNEbase X:13169486-13522078
CIL_0001X4 CIL_0001X4_0003 CGP X:13280970-13489313

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399959 DDX3X-001 protein_coding Homo_sapiens 0 737
ENST00000441189 DDX3X-005 protein_coding Homo_sapiens 0 592
ENST00000457138 DDX3X-201 protein_coding Homo_sapiens 0 399
ENST00000478993 DDX3X-002 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000480592 DDX3X-003 processed_transcript Homo_sapiens 0 270
ENST00000506389 DDX3YP3-001 processed_pseudogene Homo_sapiens 0 440
ENST00000542215 DDX3X-004 processed_transcript Homo_sapiens 0 568
ENST00000610559 DDX3X-010 processed_transcript Homo_sapiens 3e-40 169
ENST00000611546 DDX3X-008 processed_transcript Homo_sapiens 0 385
ENST00000615313 DDX3X-007 processed_transcript Homo_sapiens 0 405
ENST00000615742 DDX3X-011 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000622198 DDX3X-009 processed_transcript Homo_sapiens 0 385

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