C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: opticin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153617 Optc-002 ENSMUSG00000010311 10090 - 1:133897200-133907999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverMusclePlacentaTestisENSMUST00000153617
Transcript ID Bladder Brain Colon Liver Muscle Placenta Testis
ENSMUST00000153617 48.810±0.00 0.448±0.13 4.658±2.47 0.048±0.03 0.070±0.01 0.205±0.08 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096T CIL_00096T_0002 VISTA 1:133444227-134045719
CIL_0005VX CIL_0005VX_0002 CGP 1:133699457-133907999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016525 IMP negative regulation of angiogenesis
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367222 OPTC-001 protein_coding Homo_sapiens 0 433

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