C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leprecan 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153940 Lepre1-002 ENSMUSG00000028641 10090 + 4:119232946-119248367 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000153940
Transcript ID Ovary Placenta Testis
ENSMUST00000153940 8.412±0.00 8.439±2.11 0.972±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236040 LEPRE1-002 protein_coding Homo_sapiens 0 1825
ENST00000296388 LEPRE1-001 protein_coding Homo_sapiens 0 1825
ENST00000372526 LEPRE1-012 protein_coding Homo_sapiens 0 355
ENST00000397054 LEPRE1-201 protein_coding Homo_sapiens 0 1825
ENST00000431412 LEPRE1-008 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000447502 LEPRE1-011 protein_coding Homo_sapiens 0 444
ENST00000460031 LEPRE1-009 retained_intron Homo_sapiens 0 1332
ENST00000462474 LEPRE1-007 processed_transcript Homo_sapiens 0 361
ENST00000463465 LEPRE1-010 retained_intron Homo_sapiens 0 765
ENST00000472802 LEPRE1-006 retained_intron Homo_sapiens 0 261
ENST00000481465 LEPRE1-013 retained_intron Homo_sapiens 0 431
ENST00000492956 LEPRE1-003 retained_intron Homo_sapiens 0 555
ENST00000495874 LEPRE1-004 retained_intron Homo_sapiens 0 1142

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