C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | vacuole membrane protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000153971  |
Vmp1-004 |
ENSMUSG00000018171 |
10090 | - |
11:86585272-86602295  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008VS | CIL_0008VS_0002 | VISTA | 11:86270110-86871719 |
| CIL_0008Y2 | CIL_0008Y2_0002 | VISTA | 11:86286196-86887829 |
| CIL_00081F | CIL_00081F_0002 | VISTA | 11:86323484-86925483 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000262291
|
VMP1-001 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000536180
|
VMP1-201 | protein_coding | Homo_sapiens | 0 | 342 |
|
ENST00000587470
|
VMP1-012 | retained_intron | Homo_sapiens | 0 | 342 |
|
ENST00000588617
|
VMP1-013 | processed_transcript | Homo_sapiens | 0 | 311 |
|
ENST00000591782
|
VMP1-016 | processed_transcript | Homo_sapiens | 0 | 340 |
|
ENST00000591877
|
VMP1-014 | protein_coding | Homo_sapiens | 0 | 342 |
|
ENST00000592619
|
VMP1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 427 |
|
ENST00000592790
|
VMP1-004 | retained_intron | Homo_sapiens | 0 | 217 |
