C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase (DNA) B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154501 Helb-002 ENSMUSG00000020228 10090 - 10:120084770-120112865 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainMuscleOvaryTestisENSMUST00000154501
Transcript ID Adrenal Brain Muscle Ovary Testis
ENSMUST00000154501 0.574±0.00 0.504±0.00 0.223±0.00 1.098±0.52 0.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WI CIL_0006WI_0002 CGP 10:120083608-120202130

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004003 IDA ATP-dependent DNA helicase activity
GO:0006261 IDA DNA-dependent DNA replication
GO:0006269 TAS DNA replication, synthesis of RNA primer
GO:0032508 IEA DNA duplex unwinding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247815 HELB-001 protein_coding Homo_sapiens 0 479
ENST00000440906 HELB-003 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000542394 HELB-002 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000545134 HELB-004 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000545455 HELB-005 retained_intron Homo_sapiens 0 193

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