C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein 1 light chain 3 alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154596 Map1lc3a-003 ENSMUSG00000027602 10090 + 2:155276889-155278068 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000154596
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154596 86.118±37.08 229.216±30.13 27.579±6.54 22.030±10.07 42.287±11.00 168.795±10.46 3.343±1.06 47.573±6.29 116.424±6.64 69.902±13.84 19.976±9.14 74.340±29.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094
CIL_0006S0 CIL_0006S0_0003 CGP 2:155236533-155278073
CIL_0005BD CIL_0005BD_0002 CGP 2:155276297-155357430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360668 MAP1LC3A-002 protein_coding Homo_sapiens 0 575
ENST00000374837 MAP1LC3A-001 protein_coding Homo_sapiens 0 579
ENST00000397709 MAP1LC3A-003 protein_coding Homo_sapiens 0 479
ENST00000476428 MAP1LC3A-004 processed_transcript Homo_sapiens 0 490

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