C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | integrin alpha 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000155249  |
Itga6-004 |
ENSMUSG00000027111 |
10090 | + |
2:71826762-71854951  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008C9 | CIL_0008C9_0002 | VISTA | 2:71216484-71818219 |
| CIL_0009AY | CIL_0009AY_0002 | VISTA | 2:71227336-71828847 |
| CIL_0008AZ | CIL_0008AZ_0002 | VISTA | 2:71235378-71836557 |
| CIL_0008B0 | CIL_0008B0_0002 | VISTA | 2:71237156-71838581 |
| CIL_0003IK | CIL_0003IK_0003 | CGP | 2:71543408-71858416 |
| CIL_0004K8 | CIL_0004K8_0002 | CGP | 2:71745616-71903858 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000264107
|
ITGA6-001 | protein_coding | Homo_sapiens | 0 | 2272 |
|
ENST00000409080
|
ITGA6-004 | protein_coding | Homo_sapiens | 0 | 2091 |
|
ENST00000409532
|
ITGA6-003 | protein_coding | Homo_sapiens | 0 | 2272 |
|
ENST00000416789
|
ITGA6-006 | protein_coding | Homo_sapiens | 0 | 527 |
|
ENST00000442250
|
ITGA6-010 | protein_coding | Homo_sapiens | 0 | 2091 |
|
ENST00000458358
|
ITGA6-011 | protein_coding | Homo_sapiens | 0 | 2091 |
|
ENST00000469534
|
ITGA6-007 | retained_intron | Homo_sapiens | 0 | 385 |
|
ENST00000470259
|
ITGA6-008 | retained_intron | Homo_sapiens | 0 | 189 |
|
ENST00000475302
|
ITGA6-009 | retained_intron | Homo_sapiens | 0 | 584 |
