C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RalBP1 associated Eps domain containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155284 Reps1-003 ENSMUSG00000019854 10090 + 10:18055906-18125144 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000155284
Transcript ID Muscle
ENSMUST00000155284 1.268±0.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0006898 IEA receptor-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258062 REPS1-003 protein_coding Homo_sapiens 0 1478
ENST00000367663 REPS1-005 protein_coding Homo_sapiens 0 1849
ENST00000409812 REPS1-002 protein_coding Homo_sapiens 0 998
ENST00000414243 REPS1-010 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000415951 REPS1-015 protein_coding Homo_sapiens 0 1192
ENST00000431346 REPS1-006 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000445570 REPS1-011 nonsense_mediated_decay Homo_sapiens 0 2713
ENST00000450536 REPS1-001 protein_coding Homo_sapiens 0 1469
ENST00000478483 REPS1-009 protein_coding Homo_sapiens 0 385
ENST00000483468 REPS1-007 nonsense_mediated_decay Homo_sapiens 0 1382
ENST00000484164 REPS1-004 retained_intron Homo_sapiens 0 662
ENST00000492787 REPS1-012 retained_intron Homo_sapiens 0 468
ENST00000529423 REPS1-014 retained_intron Homo_sapiens 0 436
ENST00000529597 REPS1-013 protein_coding Homo_sapiens 0 1862
ENST00000530255 REPS1-018 protein_coding Homo_sapiens 0 233
ENST00000530575 REPS1-017 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000531675 REPS1-016 processed_transcript Homo_sapiens 0 281

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