C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155453 Galnt3-004 ENSMUSG00000026994 10090 - 2:66084086-66095224 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000155453
Transcript ID Adrenal Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000155453 0.451±0.00 1.167±0.45 0.074±0.03 7.863±1.32 0.216±0.14 0.089±0.03 1.657±0.44 3.506±0.25 23.693±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087V CIL_00087V_0002 VISTA 2:65692128-66294633
CIL_0003S2 CIL_0003S2_0003 CGP 2:65845767-66124994
CIL_0006CI CIL_0006CI_0002 CGP 2:66082766-66256617

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392701 GALNT3-001 protein_coding Homo_sapiens 0 843
ENST00000409882 GALNT3-010 protein_coding Homo_sapiens 0 843
ENST00000412248 GALNT3-004 protein_coding Homo_sapiens 0 196
ENST00000437849 GALNT3-007 nonsense_mediated_decay Homo_sapiens 5e-40 169

Loading