C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155551 Dcaf10-001 ENSMUSG00000035572 10090 + 4:45342101-45379759 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000155551
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000155551 2.298±0.46 2.076±0.00 2.481±1.24 1.735±0.24 1.302±0.14 1.001±0.06 1.596±0.29 2.034±0.63 2.145±0.30 1.020±0.10 2.243±0.58 2.258±0.62 1.328±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081A CIL_00081A_0002 VISTA 4:45205842-45807105
CIL_0006TH CIL_0006TH_0002 CGP 4:45297127-45342732
CIL_0006TG CIL_0006TG_0002 CGP 4:45316613-45379759
CIL_0006TN CIL_0006TN_0002 CGP 4:45342101-45408766

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242323 DCAF10-201 protein_coding Homo_sapiens 0 2141
ENST00000377724 DCAF10-001 protein_coding Homo_sapiens 0 2492
ENST00000461549 DCAF10-003 processed_transcript Homo_sapiens 0 634
ENST00000478453 DCAF10-004 processed_transcript Homo_sapiens 0 619
ENST00000483167 DCAF10-002 processed_transcript Homo_sapiens 0 1175

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