C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155576 Arhgap26-017 ENSMUSG00000036452 10090 + 18:38993476-39371162 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastLiverOvaryPlacentaTestisENSMUST00000155576
Transcript ID Adrenal Bladder Breast Liver Ovary Placenta Testis
ENSMUST00000155576 5.648±0.00 1.166±0.00 2.610±0.00 0.299±0.03 2.476±0.46 1.349±0.91 1.873±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0008093 IEA cytoskeletal adaptor activity
GO:0017124 IEA SH3 domain binding
GO:0043547 IEA positive regulation of GTPase activity
GO:0046847 IEA filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274498 ARHGAP26-001 protein_coding Homo_sapiens 0 2780
ENST00000378004 ARHGAP26-008 protein_coding Homo_sapiens 0 3009
ENST00000378013 ARHGAP26-014 protein_coding Homo_sapiens 0 595
ENST00000418236 ARHGAP26-020 protein_coding Homo_sapiens 0 835
ENST00000419676 ARHGAP26-019 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000421521 ARHGAP26-012 protein_coding Homo_sapiens 0 189
ENST00000424007 ARHGAP26-018 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000425417 ARHGAP26-013 protein_coding Homo_sapiens 0 279
ENST00000443674 ARHGAP26-021 protein_coding Homo_sapiens 0 1242
ENST00000451259 ARHGAP26-015 protein_coding Homo_sapiens 0 468
ENST00000461314 ARHGAP26-016 processed_transcript Homo_sapiens 0 268
ENST00000469131 ARHGAP26-004 retained_intron Homo_sapiens 0 734
ENST00000469396 ARHGAP26-005 processed_transcript Homo_sapiens 0 462
ENST00000475287 ARHGAP26-003 retained_intron Homo_sapiens 0 580
ENST00000477867 ARHGAP26-017 processed_transcript Homo_sapiens 0 416
ENST00000486650 ARHGAP26-011 processed_transcript Homo_sapiens 0 231
ENST00000489924 ARHGAP26-010 retained_intron Homo_sapiens 0 287

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