C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease H2, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155639 Rnaseh2c-004 ENSMUSG00000024925 10090 + 19:5601975-5602932 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000155639
Transcript ID Ovary Testis
ENSMUST00000155639 17.485±0.00 8.591±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308418 RNASEH2C-001 protein_coding Homo_sapiens 0 206
ENST00000527610 RNASEH2C-005 protein_coding Homo_sapiens 0 209
ENST00000528220 RNASEH2C-002 protein_coding Homo_sapiens 8e-40 169
ENST00000531596 RNASEH2C-006 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000533698 RNASEH2C-007 nonsense_mediated_decay Homo_sapiens 4.00001e-40 169
ENST00000534482 RNASEH2C-008 nonsense_mediated_decay Homo_sapiens 6e-40 169

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