C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155672 Ppp2r2d-003 ENSMUSG00000041769 10090 + 7:138846595-138883054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000155672
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000155672 11.750±0.00 21.679±2.38 14.137±0.68 21.480±9.44 22.142±0.00 7.240±2.57 8.339±2.16 14.051±0.00 12.752±0.59 16.853±3.44 13.104±2.68 41.130±2.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0003 CGP 7:138846079-138909519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0007165 IEA signal transduction
GO:0008601 IEA protein phosphatase type 2A regulator activity
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000014124 ppp2r2d-201 protein_coding Danio_rerio 0 1086
ENSDART00000114401 ppp2r2d-202 protein_coding Danio_rerio 0 1086
ENST00000420526 PPP2R2DP1-001 processed_pseudogene Homo_sapiens 0 202
ENST00000422256 PPP2R2D-201 protein_coding Homo_sapiens 0 1799
ENST00000455566 PPP2R2D-001 protein_coding Homo_sapiens 0 1825
ENST00000470416 PPP2R2D-007 nonsense_mediated_decay Homo_sapiens 0 1687
ENST00000472664 PPP2R2D-004 retained_intron Homo_sapiens 2e-28 130
ENST00000482010 PPP2R2D-005 nonsense_mediated_decay Homo_sapiens 0 950
ENST00000490777 PPP2R2D-003 retained_intron Homo_sapiens 0 1144
ENST00000517472 PPP2R2D-006 retained_intron Homo_sapiens 0 468
ENST00000616467 PPP2R2D-002 nonsense_mediated_decay Homo_sapiens 0 950

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