C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155769 Atic-004 ENSMUSG00000026192 10090 + 1:71557179-71573363 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000155769
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000155769 9.845±3.93 21.096±2.91 11.150±3.27 10.385±1.61 2.301±0.32 3.133±0.68 3.432±2.09 4.353±0.91 23.582±2.69 1.293±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MH CIL_0005MH_0002 CGP 1:71242276-71579631
CIL_0005MI CIL_0005MI_0002 CGP 1:71557150-71653200

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236959 ATIC-001 protein_coding Homo_sapiens 0 1351
ENST00000413174 ATIC-009 protein_coding Homo_sapiens 0 560
ENST00000426233 ATIC-013 protein_coding Homo_sapiens 0 311
ENST00000427397 ATIC-008 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000435675 ATIC-007 protein_coding Homo_sapiens 0 1336
ENST00000443953 ATIC-002 nonsense_mediated_decay Homo_sapiens 0 1336
ENST00000444305 ATIC-004 nonsense_mediated_decay Homo_sapiens 4.06377e-44 182
ENST00000446622 ATIC-012 protein_coding Homo_sapiens 0 440
ENST00000467388 ATIC-014 retained_intron Homo_sapiens 0 198
ENST00000479093 ATIC-016 retained_intron Homo_sapiens 0 198
ENST00000488712 ATIC-006 retained_intron Homo_sapiens 0 241

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