C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-hydroxyisobutyrate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155948 Hibadh-003 ENSMUSG00000029776 10090 - 6:52546696-52630258 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000155948
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000155948 6.557±0.00 13.513±0.00 10.834±0.00 6.646±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P6 CIL_0003P6_0002 CGP 6:52313498-52640389
CIL_0003ZJ CIL_0003ZJ_0002 CGP 6:52546228-52766780

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265395 HIBADH-001 protein_coding Homo_sapiens 0 320
ENST00000428288 HIBADH-003 nonsense_mediated_decay Homo_sapiens 0 320

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