C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly(A) binding protein, cytoplasmic 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156087 Pabpc1l-003 ENSMUSG00000054582 10090 + 2:164037000-164042547 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLiverLungENSMUST00000156087
Transcript ID Bladder Colon Liver Lung
ENSMUST00000156087 0.339±0.00 0.316±0.08 0.148±0.00 0.113±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UV CIL_0003UV_0002 CGP 2:163994960-164050538
CIL_0002ZU CIL_0002ZU_0002 CGP 2:164025450-164071169

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217073 PABPC1L-001 protein_coding Homo_sapiens 0 318
ENST00000217074 PABPC1L-017 protein_coding Homo_sapiens 4e-38 163
ENST00000255136 PABPC1L-201 protein_coding Homo_sapiens 0 318
ENST00000476056 PABPC1L-016 processed_transcript Homo_sapiens 0 318
ENST00000481196 PABPC1L-002 processed_transcript Homo_sapiens 1e-38 163
ENST00000490798 PABPC1L-010 processed_transcript Homo_sapiens 0 318
ENST00000537323 PABPC1L-202 protein_coding Homo_sapiens 5e-38 163

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