C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156226 Eif4g1-005 ENSMUSG00000045983 10090 + 16:20673295-20692884 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaTestisENSMUST00000156226
Transcript ID Brain Breast Ovary Placenta Testis
ENSMUST00000156226 65.182±0.00 22.781±0.00 79.398±0.00 143.458±54.31 32.951±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000572 CIL_000572_0002 CGP 16:20651652-20692884
CIL_00056Z CIL_00056Z_0002 CGP 16:20668313-20703048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319274 EIF4G1-201 protein_coding Homo_sapiens 0 1762
ENST00000342981 EIF4G1-001 protein_coding Homo_sapiens 0 1790
ENST00000346169 EIF4G1-007 protein_coding Homo_sapiens 0 1788
ENST00000350481 EIF4G1-009 protein_coding Homo_sapiens 0 1788
ENST00000352767 EIF4G1-202 protein_coding Homo_sapiens 0 1790
ENST00000382330 EIF4G1-014 protein_coding Homo_sapiens 0 1362
ENST00000392537 EIF4G1-003 protein_coding Homo_sapiens 0 1784
ENST00000411531 EIF4G1-038 protein_coding Homo_sapiens 0 1264
ENST00000413967 EIF4G1-004 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000414031 EIF4G1-010 protein_coding Homo_sapiens 0 1788
ENST00000421110 EIF4G1-006 protein_coding Homo_sapiens 0 322
ENST00000422614 EIF4G1-034 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000424196 EIF4G1-013 protein_coding Homo_sapiens 0 1784
ENST00000426123 EIF4G1-005 protein_coding Homo_sapiens 0 355
ENST00000427141 EIF4G1-023 protein_coding Homo_sapiens 0 224
ENST00000427845 EIF4G1-012 protein_coding Homo_sapiens 0 1264
ENST00000434061 EIF4G1-016 protein_coding Homo_sapiens 0 1784
ENST00000435046 EIF4G1-041 protein_coding Homo_sapiens 0 1777
ENST00000440448 EIF4G1-022 protein_coding Homo_sapiens 0 505
ENST00000441154 EIF4G1-039 protein_coding Homo_sapiens 0 1264
ENST00000442406 EIF4G1-002 nonsense_mediated_decay Homo_sapiens 0 1788
ENST00000450424 EIF4G1-008 protein_coding Homo_sapiens 0 420
ENST00000455679 EIF4G1-020 protein_coding Homo_sapiens 0 289
ENST00000456033 EIF4G1-024 protein_coding Homo_sapiens 0 289
ENST00000460829 EIF4G1-017 retained_intron Homo_sapiens 0 881
ENST00000475721 EIF4G1-018 retained_intron Homo_sapiens 0 1408
ENST00000478291 EIF4G1-035 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000482303 EIF4G1-033 retained_intron Homo_sapiens 1e-23 113
ENST00000485712 EIF4G1-021 retained_intron Homo_sapiens 0 222

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