C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-stranded DNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156547 Ssbp2-008 ENSMUSG00000003992 10090 + 13:91460283-91688866 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryTestisENSMUST00000156547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Testis
ENSMUST00000156547 9.864±5.02 5.124±1.07 22.897±1.14 20.295±6.90 7.822±0.45 6.054±0.96 15.800±3.57 5.947±0.76 3.225±0.46 15.124±2.02 2.755±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000922 CIL_000922_0002 VISTA 13:90886994-91490170

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320672 SSBP2-001 protein_coding Homo_sapiens 0 1194
ENST00000401636 RP3-492P14.2-001 processed_pseudogene Homo_sapiens 0 316
ENST00000504136 SSBP2-015 retained_intron Homo_sapiens 3e-22 110
ENST00000504174 SSBP2-010 processed_transcript Homo_sapiens 0 785
ENST00000504985 SSBP2-008 protein_coding Homo_sapiens 0 804
ENST00000505980 SSBP2-007 protein_coding Homo_sapiens 0 699
ENST00000506960 SSBP2-014 retained_intron Homo_sapiens 0 283
ENST00000507472 SSBP2-017 processed_transcript Homo_sapiens 0 712
ENST00000507655 SSBP2-012 processed_transcript Homo_sapiens 0 1088
ENST00000507968 SSBP2-018 processed_transcript Homo_sapiens 3e-21 106
ENST00000509013 SSBP2-013 protein_coding Homo_sapiens 0 865
ENST00000509053 SSBP2-006 protein_coding Homo_sapiens 0 776
ENST00000509743 SSBP2-019 processed_transcript Homo_sapiens 0 1040
ENST00000510060 SSBP2-021 processed_transcript Homo_sapiens 0 195
ENST00000512098 SSBP2-011 processed_transcript Homo_sapiens 0 739
ENST00000512923 SSBP2-009 protein_coding Homo_sapiens 0 915
ENST00000514493 SSBP2-003 protein_coding Homo_sapiens 0 776
ENST00000515395 SSBP2-004 protein_coding Homo_sapiens 0 665
ENST00000615665 SSBP2-201 protein_coding Homo_sapiens 0 1083
ENST00000622130 SSBP2-202 protein_coding Homo_sapiens 0 1186

Loading