C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with dual PH domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156815 Adap1-004 ENSMUSG00000056413 10090 - 5:139280522-139307809 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000156815
Transcript ID Placenta Testis
ENSMUST00000156815 8.685±0.00 0.919±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_000186 CIL_000186_0002 CGP 5:139252324-139325622
CIL_000185 CIL_000185_0002 CGP 5:139271876-139345233

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265846 ADAP1-001 protein_coding Homo_sapiens 0 388
ENST00000435943 ADAP1-005 protein_coding Homo_sapiens 0 388
ENST00000437486 ADAP1-012 protein_coding Homo_sapiens 0 196
ENST00000446141 ADAP1-002 protein_coding Homo_sapiens 0 296
ENST00000449296 ADAP1-201 protein_coding Homo_sapiens 0 296
ENST00000453823 ADAP1-009 protein_coding Homo_sapiens 0 300
ENST00000454383 ADAP1-008 protein_coding Homo_sapiens 0 300
ENST00000457254 COX19-002 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000463358 ADAP1-007 processed_transcript Homo_sapiens 0 388
ENST00000477906 ADAP1-006 processed_transcript Homo_sapiens 0 388
ENST00000478000 ADAP1-003 retained_intron Homo_sapiens 1e-34 152
ENST00000481406 ADAP1-013 retained_intron Homo_sapiens 7e-21 104
ENST00000488527 ADAP1-011 processed_transcript Homo_sapiens 0 196
ENST00000539900 ADAP1-202 protein_coding Homo_sapiens 0 388
ENST00000611167 ADAP1-203 protein_coding Homo_sapiens 0 388
ENST00000617043 ADAP1-204 protein_coding Homo_sapiens 0 196

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