C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159008 Sssca1-005 ENSMUSG00000079478 10090 - 19:5730892-5731699 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000159008
Transcript ID Brain
ENSMUST00000159008 5.473±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309328 SSSCA1-001 protein_coding Homo_sapiens 0 348
ENST00000526877 SSSCA1-004 protein_coding Homo_sapiens 0 261
ENST00000527920 SSSCA1-005 protein_coding Homo_sapiens 0 326
ENST00000531405 SSSCA1-002 protein_coding Homo_sapiens 0 326
ENST00000533115 SSSCA1-006 protein_coding Homo_sapiens 0 322

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