C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal RNA adenine dimethylase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159091 Rrnad1-004 ENSMUSG00000004896 10090 - 3:87922601-87930127 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000159091
Transcript ID Muscle Ovary
ENSMUST00000159091 2.667±0.00 7.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368216 RRNAD1-001 protein_coding Homo_sapiens 0 1210
ENST00000368218 RRNAD1-007 protein_coding Homo_sapiens 0 734
ENST00000476229 RRNAD1-003 protein_coding Homo_sapiens 0 294
ENST00000484742 RRNAD1-002 protein_coding Homo_sapiens 0 492
ENST00000517871 RRNAD1-013 retained_intron Homo_sapiens 0 392
ENST00000519086 RRNAD1-009 protein_coding Homo_sapiens 0 592
ENST00000522237 RRNAD1-011 protein_coding Homo_sapiens 0 387
ENST00000524343 RRNAD1-008 protein_coding Homo_sapiens 0 309

Loading