C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich transmembrane protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159200 Prrt4-001 ENSMUSG00000079654 10090 - 6:29169232-29179584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159200 0.883±0.44 1.217±0.34 0.095±0.03 2.374±1.32 0.557±0.41 0.254±0.10 0.236±0.08 0.107±0.04 0.023±0.02 2.287±0.16 0.137±0.06 4.573±1.41 0.070±0.03 0.151±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OF CIL_0001OF_0002 CGP 6:29123573-29179584
CIL_0001OE CIL_0001OE_0002 CGP 6:29169232-29216364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000446477 PRRT4-201 protein_coding Homo_sapiens 0 2680
ENST00000464607 PRRT4-005 protein_coding Homo_sapiens 0 542
ENST00000480290 PRRT4-003 protein_coding Homo_sapiens 0 1046
ENST00000489517 PRRT4-002 protein_coding Homo_sapiens 0 1129
ENST00000489835 PRRT4-001 protein_coding Homo_sapiens 0 811
ENST00000535159 PRRT4-202 protein_coding Homo_sapiens 0 2471

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