C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hepatoma-derived growth factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159492 Hdgf-002 ENSMUSG00000004897 10090 + 3:87906850-87914687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalTestisENSMUST00000159492
Transcript ID Adrenal Testis
ENSMUST00000159492 16.631±1.33 194.143±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0008083 ISO growth factor activity
GO:0009987 IDA cellular process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357325 HDGF-001 protein_coding Homo_sapiens 0 728
ENST00000368206 HDGF-003 protein_coding Homo_sapiens 0 728
ENST00000368209 HDGF-002 protein_coding Homo_sapiens 0 730
ENST00000465180 HDGF-009 processed_transcript Homo_sapiens 0 728
ENST00000469145 HDGF-005 processed_transcript Homo_sapiens 0 353
ENST00000471377 HDGF-004 processed_transcript Homo_sapiens 0 353
ENST00000482651 HDGF-006 processed_transcript Homo_sapiens 0 728
ENST00000495212 HDGF-007 processed_transcript Homo_sapiens 0 472
ENST00000537739 HDGF-201 protein_coding Homo_sapiens 0 728

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