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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Sjogren's syndrome/scleroderma autoantigen 1 homolog (human) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000159693  |
Sssca1-002 |
ENSMUSG00000079478 |
10090 | - |
19:5730307-5731732  |
protein_coding |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W1 | CIL_0008W1_0002 | VISTA | 19:5510095-6112698 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0042802 | IPI | identical protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000309328
|
SSSCA1-001 | protein_coding | Homo_sapiens | 0 | 632 |
|
ENST00000526877
|
SSSCA1-004 | protein_coding | Homo_sapiens | 0 | 512 |
|
ENST00000527920
|
SSSCA1-005 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000531405
|
SSSCA1-002 | protein_coding | Homo_sapiens | 0 | 577 |
|
ENST00000533115
|
SSSCA1-006 | protein_coding | Homo_sapiens | 0 | 573 |
